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CWA prototype - Calpain 3 (continued)

May 5th, 2009 · No Comments

Update from latest telcon by Eric:

  • The knowledge base triples do not contain human readable labels (yet); these could come from UMLS, but the UMLS upload was not yet successful (it contains a limited set of triples.
  • Another approach may be to try to create REST calls to public databases (i.e. URIs).
  • The cwa repository should contain lovd data now.

I will try to reach LOVD data, and perhaps some other data to link out from.

First I had to figure out how to do regex on parts of URIs; there is a string representation function; this works:
PREFIX cwa: <http://www.nbic.nl/cwa#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
SELECT ?cwa_concept ?relation ?cwa_concept2
WHERE {
?cwa_concept ?relation ?cwa_concept2.
FILTER (regex(str(?cwa_concept),”C3000052″,”i”))
}

This filter
FILTER (regex(str(?cwa_concept),”lovd”,”i”) || regex(str(?relation),”lovd”,”i”) || regex(str(?cwa_concept2),”lovd”,”i”))
in the query above did not give any results; I’ve asked Erik what I should do to get something from lovd.

Tags: CWA-NL-prototype

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